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LOC6626878 ubiquitin carboxyl-terminal hydrolase calypso [ Drosophila virilis ]

Gene ID: 6626878, updated on 14-Dec-2023

Summary

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Gene symbol
LOC6626878
Gene description
ubiquitin carboxyl-terminal hydrolase calypso
Locus tag
Dvir_GJ20906
See related
EnsemblRapid:LOC6626878
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ20906; calypso; GJ20906-PA
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587570.1 (2270928..2272593)

NW_022587570.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC26531552 Neighboring gene uncharacterized LOC116649741 Neighboring gene protein clueless Neighboring gene PRKR-interacting protein 1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587570 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase calypso
Names
BAP1 homolog
Dvir\GJ20906
Dvir\GJ20906-PA
dvir_GLEANR_6311

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587570.1 Reference DvirRS2

    Range
    2270928..2272593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002049118.3 → XP_002049154.1  ubiquitin carboxyl-terminal hydrolase calypso

    See identical proteins and their annotated locations for XP_002049154.1

    UniProtKB/Swiss-Prot
    B4LQ24
    Related
    XP_002049154.1, XM_002049118.3
    Conserved Domains (1) summary
    cd09617
    Location:30 → 258
    Peptidase_C12_UCH37_BAP1; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-L5) and BAP1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B4LQ24.1 GenPept UniProtKB/Swiss-Prot:B4LQ24

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