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LOC6623949 failed axon connections [ Drosophila virilis ]

Gene ID: 6623949, updated on 14-Dec-2023

Summary

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Gene symbol
LOC6623949
Gene description
failed axon connections
Locus tag
Dvir_GJ12617
See related
EnsemblRapid:LOC6623949
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
fax; fax-PB; GJ12617; Dvir\fax; GJ12617-PB
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587564.1 (21180867..21188889)

NW_022587564.1Genomic Context describing neighboring genes Neighboring gene tyrosine--tRNA ligase, cytoplasmic Neighboring gene probable glutamate--tRNA ligase, mitochondrial Neighboring gene serine incorporator 1 Neighboring gene uncharacterized LOC6622184 Neighboring gene uncharacterized LOC6623867 Neighboring gene mediator of RNA polymerase II transcription subunit 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587564 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
failed axon connections
Names
Dvir\GJ12617
Dvir\GJ12617-PB
Dvir\fax-PB
dvir_GLEANR_12573

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587564.1 Reference DvirRS2

    Range
    21180867..21188889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032435353.1 → XP_032291244.1  failed axon connections isoform X1

    Related
    XP_032291244.1, XM_032435353.1
    Conserved Domains (2) summary
    cd03193
    Location:279 → 350
    GST_C_Metaxin; C-terminal, alpha helical domain of Metaxin and related proteins
    cd03080
    Location:112 → 186
    GST_N_Metaxin_like; GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It ...

  2. XM_002046210.3 → XP_002046246.2  failed axon connections isoform X2

    UniProtKB/TrEMBL
    B4LI44
    Related
    XP_002046246.2, XM_002046210.3
    Conserved Domains (2) summary
    cd03193
    Location:276 → 347
    GST_C_Metaxin; C-terminal, alpha helical domain of Metaxin and related proteins
    cd03080
    Location:112 → 186
    GST_N_Metaxin_like; GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It ...
Nucleotide Protein Strain
Heading Accession and Version

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