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1110059E24Rik RIKEN cDNA 1110059E24 gene [ Mus musculus (house mouse) ]

Gene ID: 66206, updated on 31-Jan-2019

Summary

Official Symbol
1110059E24Rikprovided by MGI
Official Full Name
RIKEN cDNA 1110059E24 geneprovided by MGI
Primary source
MGI:MGI:1913456
See related
Ensembl:ENSMUSG00000035171
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in CNS E11.5 (RPKM 13.8), bladder adult (RPKM 13.6) and 23 other tissues See more
Orthologs

Genomic context

See 1110059E24Rik in Genome Data Viewer
Location:
19; 19 B
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (21597313..21652791, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (21671803..21727281, complement)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene guanine deaminase Neighboring gene predicted gene, 38486 Neighboring gene abhydrolase domain containing 17B Neighboring gene predicted gene, 41818

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C9orf85 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025423.2NP_079699.1  uncharacterized protein C9orf85 homolog

    See identical proteins and their annotated locations for NP_079699.1

    Status: PREDICTED

    Source sequence(s)
    AK004308
    Consensus CDS
    CCDS29699.1
    UniProtKB/Swiss-Prot
    Q9CQ90
    Related
    ENSMUSP00000048395.3, ENSMUST00000038830.9
    Conserved Domains (1) summary
    pfam10217
    Location:15102
    DUF2039; Uncharacterized conserved protein (DUF2039)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

    Range
    21597313..21652791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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