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Tma7 translational machinery associated 7 [ Mus musculus (house mouse) ]

Gene ID: 66167, updated on 5-Mar-2024

Summary

Official Symbol
Tma7provided by MGI
Official Full Name
translational machinery associated 7provided by MGI
Primary source
MGI:MGI:1913417
See related
Ensembl:ENSMUSG00000091537 AllianceGenome:MGI:1913417
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ccdc72; 1110017O22Rik
Summary
Predicted to be involved in cytoplasmic translation. Is expressed in retina inner nuclear layer and retina outer nuclear layer. Orthologous to human TMA7 (translation machinery associated 7 homolog). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E11.5 (RPKM 90.6), placenta adult (RPKM 86.2) and 20 other tissues See more
Orthologs
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Genomic context

Location:
9 F2; 9 59.63 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (108907056..108911449, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109077988..109082381, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5107 Neighboring gene predicted gene, 53191 Neighboring gene three prime repair exonuclease 1 Neighboring gene ATR interacting protein Neighboring gene STARR-positive B cell enhancer ABC_E1794 Neighboring gene coiled-coil domain containing 51 Neighboring gene predicted gene 7628 Neighboring gene plexin B1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
translation machinery-associated protein 7
Names
coiled-coil domain containing 72
coiled-coil domain-containing protein 72
translational machinery associated 7 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183250.2NP_899073.1  translation machinery-associated protein 7

    See identical proteins and their annotated locations for NP_899073.1

    Status: PROVISIONAL

    Source sequence(s)
    AK003762
    Consensus CDS
    CCDS52930.1
    UniProtKB/Swiss-Prot
    Q8K003
    UniProtKB/TrEMBL
    Q14A47
    Related
    ENSMUSP00000133026.2, ENSMUST00000167504.3
    Conserved Domains (1) summary
    pfam09072
    Location:364
    TMA7; Translation machinery associated TMA7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    108907056..108911449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)