Format

Send to:

Choose Destination

Wfdc21 WAP four-disulfide core domain 21 [ Mus musculus (house mouse) ]

Gene ID: 66107, updated on 25-Sep-2020

Summary

Official Symbol
Wfdc21provided by MGI
Official Full Name
WAP four-disulfide core domain 21provided by MGI
Primary source
MGI:MGI:1913357
See related
Ensembl:ENSMUSG00000051748
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Wdnm1-l; Wdnm1-like; 1100001G20Rik
Expression
Biased expression in liver adult (RPKM 606.7), subcutaneous fat pad adult (RPKM 52.7) and 2 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Wfdc21 in Genome Data Viewer
Location:
11; 11 C
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (83637766..83643472)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (83746940..83752646)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (83560442..83566148)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene WAP four-disulfide core domain 17 Neighboring gene WAP four-disulfide core domain 18 Neighboring gene HEAT repeat containing 6 Neighboring gene COMM domain containing 9 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enzyme activator activity IDA
Inferred from Direct Assay
more info
PubMed 
peptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
serine-type endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
antibacterial humoral response IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
innate immune response IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
response to lipopolysaccharide IDA
Inferred from Direct Assay
more info
PubMed 
response to tumor necrosis factor IDA
Inferred from Direct Assay
more info
PubMed 
white fat cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 
extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
extracellular space IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183249.2NP_899072.1  protein Wfdc21 precursor

    See identical proteins and their annotated locations for NP_899072.1

    Status: VALIDATED

    Source sequence(s)
    AA254806, BY082582, BY094209
    Consensus CDS
    CCDS36258.1
    UniProtKB/Swiss-Prot
    Q8BTE6
    Related
    ENSMUSP00000064479.2, ENSMUST00000070832.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    83637766..83643472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center