U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Tmem167 transmembrane protein 167 [ Mus musculus (house mouse) ]

Gene ID: 66074, updated on 8-Feb-2024

Summary

Official Symbol
Tmem167provided by MGI
Official Full Name
transmembrane protein 167provided by MGI
Primary source
MGI:MGI:1913324
See related
Ensembl:ENSMUSG00000012422 AllianceGenome:MGI:1913324
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10085; Tmem167a; 0610041E09Rik; 5730424F14Rik
Summary
Predicted to be involved in constitutive secretory pathway; intracellular transport; and protein secretion. Predicted to be located in Golgi apparatus. Orthologous to human TMEM167A (transmembrane protein 167A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in limb E14.5 (RPKM 5.4), placenta adult (RPKM 5.0) and 26 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Tmem167 in Genome Data Viewer
Location:
13 C3; 13 45.5 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (90237843..90263047)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (90089667..90114921)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene 4117 Neighboring gene predicted gene, 50611 Neighboring gene STARR-seq mESC enhancer starr_35226 Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 4 Neighboring gene STARR-seq mESC enhancer starr_35227 Neighboring gene STARR-seq mESC enhancer starr_35228 Neighboring gene STARR-seq mESC enhancer starr_35229 Neighboring gene STARR-positive B cell enhancer mm9_chr13:90229070-90229371 Neighboring gene predicted gene, 24507 Neighboring gene STARR-seq mESC enhancer starr_35230 Neighboring gene predicted gene, 41013 Neighboring gene predicted gene, 29680

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in constitutive secretory pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein secretion IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein kish-A
Names
transmembrane protein 167A
NP_079611.2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025335.4NP_079611.2  protein kish-A precursor

    See identical proteins and their annotated locations for NP_079611.2

    Status: VALIDATED

    Source sequence(s)
    AC155234, AC155248
    Consensus CDS
    CCDS36741.1
    UniProtKB/Swiss-Prot
    Q8R3W3, Q9CR64, Q9CZU1
    Related
    ENSMUSP00000125314.2, ENSMUST00000161568.8
    Conserved Domains (1) summary
    pfam06842
    Location:1044
    DUF1242; Protein of unknown function (DUF1242)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    90237843..90263047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)