U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6564772 sodium leak channel non-selective protein [ Drosophila grimshawi ]

Gene ID: 6564772, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC6564772
Gene description
sodium leak channel non-selective protein
Locus tag
Dgri_GH12930
See related
EnsemblRapid:LOC6564772
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH12930; GH12930-PA
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063692.1 (14337358..14345925, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961676.1 (11987437..11996007)

NW_025063692.1Genomic Context describing neighboring genes Neighboring gene antigen 5 like allergen Cul n 1 Neighboring gene mucin-2 Neighboring gene plasminogen receptor (KT) Neighboring gene tyrosine aminotransferase Neighboring gene uncharacterized LOC116805590

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium leak channel non-selective protein
Names
Dgri\GH12930
Dgri\GH12930-PA
dgri_GLEANR_12831

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063692.1 Reference ASM1815329v1

    Range
    14337358..14345925 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001991896.3 → XP_001991932.1  sodium leak channel non-selective protein isoform X1

    See identical proteins and their annotated locations for XP_001991932.1

    UniProtKB/TrEMBL
    B4JJ16
    Related
    XP_001991932.1, XM_001991896.3
    Conserved Domains (2) summary
    cd13433
    Location:1407 → 1445
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:610 → 832
    Ion_trans; Ion transport protein

  2. XM_043216211.1 → XP_043072146.1  sodium leak channel non-selective protein isoform X2

    Related
    XP_043072146.1, XM_043216211.1

  3. XM_032738330.1 → XP_032594221.1  sodium leak channel non-selective protein isoform X1

    UniProtKB/TrEMBL
    B4JJ16
    Related
    XP_032594221.1, XM_032738330.1
    Conserved Domains (2) summary
    cd13433
    Location:1407 → 1445
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:610 → 832
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases