Format

Send to:

Choose Destination

PCP4L1 Purkinje cell protein 4 like 1 [ Homo sapiens (human) ]

Gene ID: 654790, updated on 25-Jan-2022

Summary

Official Symbol
PCP4L1provided by HGNC
Official Full Name
Purkinje cell protein 4 like 1provided by HGNC
Primary source
HGNC:HGNC:20448
See related
Ensembl:ENSG00000248485 AllianceGenome:HGNC:20448
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IQM1
Expression
Biased expression in urinary bladder (RPKM 16.5), brain (RPKM 14.3) and 10 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PCP4L1 in Genome Data Viewer
Location:
1q23.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (161258734..161285450)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (161228535..161255240)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene translocase of outer mitochondrial membrane 40 like Neighboring gene microRNA 5187 Neighboring gene nuclear receptor subfamily 1 group I member 3 Neighboring gene uncharacterized LOC105371472 Neighboring gene uncharacterized LOC107985221 Neighboring gene myelin protein zero

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
Purkinje cell protein 4-like protein 1
Names
PCP4-like protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102566.2NP_001096036.1  Purkinje cell protein 4-like protein 1

    See identical proteins and their annotated locations for NP_001096036.1

    Status: VALIDATED

    Source sequence(s)
    BC028905, CD237602, CN283207
    Consensus CDS
    CCDS53412.1
    UniProtKB/Swiss-Prot
    A6NKN8
    Related
    ENSP00000426296.1, ENST00000504449.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    161258734..161285450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017002154.2XP_016857643.1  Purkinje cell protein 4-like protein 1 isoform X1

Support Center