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LOC6547862 glycogen debranching enzyme [ Drosophila erecta ]

Gene ID: 6547862, updated on 21-Dec-2023

Summary

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Gene symbol
LOC6547862
Gene description
glycogen debranching enzyme
Locus tag
Dere_GG22109
See related
EnsemblRapid:LOC6547862
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG22109; GG22109-PA; GG22109-PB; GG22109-PC; GG22109-PD
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (11496998..11504109, complement)

NW_020825207.1Genomic Context describing neighboring genes Neighboring gene helicase domino Neighboring gene small nucleolar RNA Me28S-Am2589 Neighboring gene putative sodium-coupled neutral amino acid transporter 10 Neighboring gene uncharacterized LOC26526246 Neighboring gene protein panoramix Neighboring gene kinase D-interacting substrate of 220 kDa Neighboring gene queuosine salvage protein Neighboring gene 60S ribosomal protein L29

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825207 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amylo-alpha-1,6-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen debranching enzyme
Names
Dere\GG22109
Dere\GG22109-PA
Dere\GG22109-PB
Dere\GG22109-PC
Dere\GG22109-PD
dere_GLEANR_6864

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825207.1 Reference DereRS2

    Range
    11496998..11504109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015156754.2 → XP_015012240.2  glycogen debranching enzyme isoform X2

    UniProtKB/TrEMBL
    A0A0Q5VTL3
    Related
    XP_015012240.2, XM_015156754.2
    Conserved Domains (1) summary
    TIGR01531
    Location:25 → 1534
    glyc_debranch; glycogen debranching enzymye

  2. XM_015156753.2 → XP_015012239.2  glycogen debranching enzyme isoform X2

    UniProtKB/TrEMBL
    A0A0Q5VTL3
    Related
    XP_015012239.2, XM_015156753.2
    Conserved Domains (1) summary
    TIGR01531
    Location:25 → 1534
    glyc_debranch; glycogen debranching enzymye

  3. XM_001975009.3 → XP_001975045.2  glycogen debranching enzyme isoform X1

    UniProtKB/TrEMBL
    B3NJL4
    Related
    XP_001975045.2, XM_001975009.3
    Conserved Domains (1) summary
    TIGR01531
    Location:129 → 1638
    glyc_debranch; glycogen debranching enzymye
Nucleotide Protein
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