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FOXD4L6 forkhead box D4 like 6 [ Homo sapiens (human) ]

Gene ID: 653404, updated on 5-Aug-2022

Summary

Official Symbol
FOXD4L6provided by HGNC
Official Full Name
forkhead box D4 like 6provided by HGNC
Primary source
HGNC:HGNC:31986
See related
Ensembl:ENSG00000273514 AllianceGenome:HGNC:31986
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of chromatin. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See FOXD4L6 in Genome Data Viewer
Location:
9p11.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (41126435..41128681, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (42166318..42168564)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (69199664..69201910, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376058 Neighboring gene long intergenic non-protein coding RNA 3025 Neighboring gene Zn regulated GTPase metalloprotein activator 1F Neighboring gene protein FRG1B-like

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC119257

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in chromatin ISA
Inferred from Sequence Alignment
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
forkhead box protein D4-like 6
Names
FOXD4-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085476.4NP_001078945.1  forkhead box protein D4-like 6

    See identical proteins and their annotated locations for NP_001078945.1

    Status: VALIDATED

    Source sequence(s)
    BX255923
    Consensus CDS
    CCDS43826.1
    UniProtKB/Swiss-Prot
    Q3SYB3, Q4V336
    Related
    ENSP00000484875.1, ENST00000622588.2
    Conserved Domains (1) summary
    pfam00250
    Location:108194
    Forkhead; Forkhead domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    41126435..41128681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    42166318..42168564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)