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AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene [ Homo sapiens (human) ]

Gene ID: 653268, updated on 24-Nov-2020

Summary

Official Symbol
AGAP7Pprovided by HGNC
Official Full Name
ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:23465
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AGAP7; AGAP-7; CTGLF4; bA109G10.1
Expression
Ubiquitous expression in testis (RPKM 14.9), prostate (RPKM 10.4) and 25 other tissues See more

Genomic context

See AGAP7P in Genome Data Viewer
Location:
10q11.22
Exon count:
7
Annotation release Status Assembly Chr Location
109.20201120 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (46109495..46131678)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (51464151..51486327, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378287 Neighboring gene microseminoprotein beta Neighboring gene ribosomal protein L23a pseudogene 61 Neighboring gene ANTXR like pseudogene 1 Neighboring gene adenosylhomocysteinase pseudogene 1 Neighboring gene uncharacterized LOC105378577

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7 pseudogene
  • centaurin, gamma-like family, member 4
  • putative Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7

Gene Ontology Provided by GOA

Function Evidence Code Pubs
GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126580.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA337655, AL040331, AL589822, AW014387, BY996334

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20201120

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    46109495..46131678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001077685.2: Suppressed sequence

    Description
    NM_001077685.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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