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ABCC6P1 ATP binding cassette subfamily C member 6 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 653190, updated on 25-Jan-2022

Summary

Official Symbol
ABCC6P1provided by HGNC
Official Full Name
ATP binding cassette subfamily C member 6 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:33352
See related
Ensembl:ENSG00000256340 AllianceGenome:HGNC:33352
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in liver (RPKM 11.4), kidney (RPKM 6.4) and 9 other tissues See more
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Genomic context

See ABCC6P1 in Genome Data Viewer
Location:
16p12.3
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (18571248..18598289)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (18582570..18609611)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379460 Neighboring gene microRNA 3179-4 Neighboring gene NODAL modulator 2 Neighboring gene Sharpr-MPRA regulatory region 10538 Neighboring gene ribosomal protein S15a Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • ATP binding cassette subfamily C member 6 pseudogene 1 (functional)
  • ATP-binding cassette, sub-family C, member 6 pseudogene 1 (functional)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003569.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    BC075833
    Related
    ENST00000546162.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    18571248..18598289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187607.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    962188..984527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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