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GUSBP3 GUSB pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 653188, updated on 23-Nov-2021

Summary

Official Symbol
GUSBP3provided by HGNC
Official Full Name
GUSB pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:37301
See related
Ensembl:ENSG00000253203
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SMA3; GUSBP1
Expression
Broad expression in testis (RPKM 23.2), thyroid (RPKM 10.1) and 24 other tissues See more
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Genomic context

See GUSBP3 in Genome Data Viewer
Location:
5q13.2
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (69639463..69710527, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (68935290..69006354, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene NAIP pseudogene 3 Neighboring gene POM121 membrane glycoprotein (rat) pseudogene Neighboring gene POM121 membrane glycoprotein (rat) pseudogene Neighboring gene uncharacterized LOC107986357 Neighboring gene uncharacterized LOC105379623

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • Putative inactive beta-glucuronidase-like protein SMA3
  • glucuronidase, beta pseudogene 3

Clone Names

  • FLJ42136, MGC22265

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables beta-glucuronidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables carbohydrate binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in glucuronoside catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in nervous system development TAS
Traceable Author Statement
more info
PubMed 
involved_in skeletal system development TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027386.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139495
    Related
    ENST00000513408.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    69639463..69710527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_016107297.1 Reference GRCh38.p13 PATCHES

    Range
    120176..126794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NW_003315917.2 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    639240..645842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_2

Genomic

  1. NT_187651.1 Reference GRCh38.p13 ALT_REF_LOCI_2

    Range
    49394..121540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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