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LOC6530298 trypsin delta [ Drosophila yakuba ]

Gene ID: 6530298, updated on 7-Dec-2023

Summary

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Gene symbol
LOC6530298
Gene description
trypsin delta
Locus tag
Dyak_GE12354
See related
EnsemblRapid:LOC6530298
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE12354; GE12354-PA
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Genomic context

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Location:
chromosome: 2R
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 2R NC_052528.2 (12310609..12311473, complement)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 2R NC_052528.1 (12310640..12311503, complement)

Chromosome 2R - NC_052528.2Genomic Context describing neighboring genes Neighboring gene trypsin iota Neighboring gene coiled-coil domain-containing protein 103 Neighboring gene trypsin delta Neighboring gene trypsin beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Landscape of standing variation for tandem duplications in Drosophila yakuba and Drosophila simulans. Rogers RL, et al. Mol Biol Evol, 2014 Jul. PMID 24710518, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trypsin delta
Names
Dyak\GE12354
Dyak\GE12354-PA
dyak_GLEANR_12616

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052528.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    12310609..12311473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002091189.4 → XP_002091225.1  trypsin delta

    See identical proteins and their annotated locations for XP_002091225.1

    UniProtKB/TrEMBL
    B4P6I5
    Related
    XP_002091225.1, XM_002091189.4
    Conserved Domains (2) summary
    smart00020
    Location:30 → 249
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:31 → 249
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein Strain
Heading Accession and Version

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