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COA7 cytochrome c oxidase assembly factor 7 (putative) [ Homo sapiens (human) ]

Gene ID: 65260, updated on 4-May-2020

Summary

Official Symbol
COA7provided by HGNC
Official Full Name
cytochrome c oxidase assembly factor 7 (putative)provided by HGNC
Primary source
HGNC:HGNC:25716
See related
Ensembl:ENSG00000162377 MIM:615623
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RESA1; SCAN3; SELRC1; C1orf163
Expression
Ubiquitous expression in brain (RPKM 6.1), colon (RPKM 6.0) and 25 other tissues See more
Orthologs

Genomic context

See COA7 in Genome Data Viewer
Location:
1p32.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (52684449..52698347, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (53152014..53164038, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene glutathione peroxidase 7 Neighboring gene shisa like 2A Neighboring gene Sharpr-MPRA regulatory region 2435 Neighboring gene NADH:ubiquinone oxidoreductase subunit S5 pseudogene 3 Neighboring gene RNA, 7SL, cytoplasmic 62, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

HIV-1 interactions

Replication interactions

Interaction Pubs
Knockdown of Sel1 repeat containing 1 (SELRC1; C1orf163) by shRNA library screening inhibits HIV-1 replication in cultured Jurkat T-cells PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ12439

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial intermembrane space IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
cytochrome c oxidase assembly factor 7
Names
Sel1 repeat containing 1
beta-lactamase hcp-like protein
epididymis secretory sperm binding protein
hcp beta-lactamase-like protein C1orf163
respiratory chain assembly 1
respiratory chain assembly factor 1
sel1 repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023077.3NP_075565.2  cytochrome c oxidase assembly factor 7

    See identical proteins and their annotated locations for NP_075565.2

    Status: VALIDATED

    Source sequence(s)
    AC099784, AK022501, BC015313
    Consensus CDS
    CCDS570.1
    UniProtKB/Swiss-Prot
    Q96BR5
    Related
    ENSP00000360593.3, ENST00000371538.5
    Conserved Domains (2) summary
    COG0790
    Location:31218
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:5080
    SLR; SLR repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    52684449..52698347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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