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ZKSCAN8P1 ZKSCAN8 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 651302, updated on 23-Nov-2021

Summary

Official Symbol
ZKSCAN8P1provided by HGNC
Official Full Name
ZKSCAN8 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:18777
See related
Ensembl:ENSG00000226314
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF389; ZNF389P; ZNF192P1; dJ265C24.4
Expression
Broad expression in testis (RPKM 2.1), thyroid (RPKM 1.1) and 23 other tissues See more
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Genomic context

See ZKSCAN8P1 in Genome Data Viewer
Location:
6p22.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (28161761..28169595)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (28129539..28137373)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ZSCAN16 antisense RNA 1 Neighboring gene zinc finger and SCAN domain containing 16 Neighboring gene zinc finger with KRAB and SCAN domains 8 Neighboring gene zinc finger protein 603, pseudogene Neighboring gene ZKSCAN8 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity.
GeneReviews: Not available

General gene information

Markers

Other Names

  • zinc finger protein 192 pseudogene 1
  • zinc finger protein 389, pseudogene

Clone Names

  • FLJ18148

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103448.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL022393, AL358933, BF475295, DB298810, HY011556
    Related
    ENST00000440790.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    28161761..28169595
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001145129.1: Suppressed sequence

    Description
    NM_001145129.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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