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PRAMEF2 PRAME family member 2 [ Homo sapiens (human) ]

Gene ID: 65122, updated on 23-Nov-2021

Summary

Official Symbol
PRAMEF2provided by HGNC
Official Full Name
PRAME family member 2provided by HGNC
Primary source
HGNC:HGNC:28841
See related
Ensembl:ENSG00000120952
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DJ845O24.3
Expression
Low expression observed in reference dataset See more
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Genomic context

See PRAMEF2 in Genome Data Viewer
Location:
1p36.21
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (12857086..12861909)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (12916941..12921764)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene PRAME family member 30, pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein C like 1 Neighboring gene PRAME family member 4 Neighboring gene PRAME family member 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ43580

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023014.1NP_075390.1  PRAME family member 2

    See identical proteins and their annotated locations for NP_075390.1

    Status: VALIDATED

    Source sequence(s)
    AL049674
    Consensus CDS
    CCDS149.1
    UniProtKB/Swiss-Prot
    O60811
    Related
    ENSP00000240189.2, ENST00000240189.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    12857086..12861909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011542004.1XP_011540306.1  PRAME family member 2 isoform X1

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_012132914.1 Reference GRCh38.p13 PATCHES

    Range
    38599..43422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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