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Lpar3 lysophosphatidic acid receptor 3 [ Mus musculus (house mouse) ]

Gene ID: 65086, updated on 5-Jan-2023

Summary

Official Symbol
Lpar3provided by MGI
Official Full Name
lysophosphatidic acid receptor 3provided by MGI
Primary source
MGI:MGI:1929469
See related
Ensembl:ENSMUSG00000036832 AllianceGenome:MGI:1929469
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Edg7; lpA3
Summary
Predicted to enable G protein-coupled receptor activity; G-protein alpha-subunit binding activity; and phospholipid binding activity. Involved in gene expression. Acts upstream of or within several processes, including bleb assembly; positive regulation of MAPK cascade; and positive regulation of collateral sprouting. Located in axon. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; hemolymphoid system gland; and sensory organ. Orthologous to human LPAR3 (lysophosphatidic acid receptor 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 14.3), testis adult (RPKM 9.9) and 11 other tissues See more
Orthologs
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Genomic context

See Lpar3 in Genome Data Viewer
Location:
3 H2; 3 71.03 cM
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (145926716..145991969)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (146220961..146286214)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene mucolipin 3 Neighboring gene predicted gene, 25627 Neighboring gene mucolipin 2 Neighboring gene predicted gene, 40167 Neighboring gene predicted gene 10636

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables G-protein alpha-subunit binding ISO
Inferred from Sequence Orthology
more info
 
enables lysophosphatidic acid receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables phospholipid binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in axon IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
lysophosphatidic acid receptor 3
Names
LPA receptor 3
LPA-3
endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor 7
lysophosphatidic acid receptor Edg-7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022983.4NP_075359.1  lysophosphatidic acid receptor 3

    See identical proteins and their annotated locations for NP_075359.1

    Status: VALIDATED

    Source sequence(s)
    AC122513, AK042084
    Consensus CDS
    CCDS17901.1
    UniProtKB/Swiss-Prot
    Q9EQ31
    UniProtKB/TrEMBL
    A0A8C6GLF6, Q544B4
    Related
    ENSMUSP00000037712.3, ENSMUST00000039164.4
    Conserved Domains (2) summary
    pfam00001
    Location:48293
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:42309
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    145926716..145991969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)