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GAS6-AS1 GAS6 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 650669, updated on 10-Oct-2023

Summary

Official Symbol
GAS6-AS1provided by HGNC
Official Full Name
GAS6 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:39826
See related
AllianceGenome:HGNC:39826
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in lung (RPKM 15.4), endometrium (RPKM 13.5) and 25 other tissues See more
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Genomic context

See GAS6-AS1 in Genome Data Viewer
Location:
13q34
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (113815610..113842841)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (113023551..113053129)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (114518583..114545814)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114305936-114306560 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114306561-114307185 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114311832-114312332 Neighboring gene ATPase H+/K+ transporting subunit beta Neighboring gene G protein-coupled receptor kinase 1 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:114426222-114426826 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114426827-114427432 Neighboring gene basic salivary proline-rich protein 4-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114446225-114446726 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:114456174-114456392 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114461359-114461860 Neighboring gene long intergenic non-protein coding RNA 552 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114462417-114462918 Neighboring gene transmembrane protein 255B Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114491163-114491692 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114491693-114492221 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114504133-114505007 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114506713-114507271 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8040 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8041 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8042 Neighboring gene uncharacterized LOC124903220 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114523566-114524115 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114524665-114525213 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8043 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114540573-114541125 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114541680-114542232 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114542404-114542980 Neighboring gene growth arrest specific 6 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114551447-114552070 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114552071-114552692 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114555417-114555918 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114555919-114556418 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114556794-114557508 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114557509-114558222 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114563503-114564094 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5551 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114566463-114567054 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114576933-114577480 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114577481-114578027 Neighboring gene GAS6 divergent transcript Neighboring gene long intergenic non-protein coding RNA 454

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

General gene information

Other Names

  • GAS6 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ35543, FLJ41484

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_044995.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA971263, BC137379, BX385300, DA460725

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    113815610..113842841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    113023551..113053129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039799.1: Suppressed sequence

    Description
    NM_001039799.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.