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STMP1 short transmembrane mitochondrial protein 1 [ Homo sapiens (human) ]

Gene ID: 647087, updated on 2-Feb-2020

Summary

Official Symbol
STMP1provided by HGNC
Official Full Name
short transmembrane mitochondrial protein 1provided by HGNC
Primary source
HGNC:HGNC:41909
See related
Ensembl:ENSG00000243317 MIM:618755
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Mm47; C7orf73; PL-5283
Expression
Ubiquitous expression in thyroid (RPKM 20.9), testis (RPKM 17.4) and 25 other tissues See more
Orthologs

Genomic context

See STMP1 in Genome Data Viewer
Location:
7q33
Exon count:
3
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (135662514..135676416)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (135347221..135361160)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene MAX pseudogene Neighboring gene ribosomal protein L15 pseudogene 11 Neighboring gene RNA, U6 small nuclear 1154, pseudogene Neighboring gene uncharacterized LOC105375521 Neighboring gene solute carrier family 13 member 4 Neighboring gene family with sequence similarity 180 member A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial respiratory chain IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
short transmembrane mitochondrial protein 1
Names
uncharacterized protein C7orf73

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130929.2NP_001124401.1  short transmembrane mitochondrial protein 1 precursor

    See identical proteins and their annotated locations for NP_001124401.1

    Status: VALIDATED

    Source sequence(s)
    AC091736, BC073942, BM979743
    Consensus CDS
    CCDS55168.1
    UniProtKB/Swiss-Prot
    E0CX11
    Related
    ENSP00000425996.1, ENST00000507606.3
    Conserved Domains (1) summary
    pfam15054
    Location:444
    DUF4535; Domain of unknown function (DUF4535)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    135662514..135676416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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