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C6orf132 chromosome 6 open reading frame 132 [ Homo sapiens (human) ]

Gene ID: 647024, updated on 11-Sep-2019

Summary

Official Symbol
C6orf132provided by HGNC
Official Full Name
chromosome 6 open reading frame 132provided by HGNC
Primary source
HGNC:HGNC:21288
See related
Ensembl:ENSG00000188112
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bA7K24.2
Expression
Biased expression in esophagus (RPKM 16.8), skin (RPKM 9.1) and 11 other tissues See more
Orthologs

Genomic context

See C6orf132 in Genome Data Viewer
Location:
6p21.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (42101119..42142620, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (42068857..42110715, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene cyclin D3 Neighboring gene skeletal muscle cis-regulatory module in CCND3 intron Neighboring gene TATA-box binding protein associated factor 8 Neighboring gene Uncharacterized protein 114841037 Neighboring gene guanylate cyclase activator 1A Neighboring gene guanylate cyclase activator 1B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
Genome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
uncharacterized protein C6orf132

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164446.3NP_001157918.1  uncharacterized protein C6orf132

    See identical proteins and their annotated locations for NP_001157918.1

    Status: VALIDATED

    Source sequence(s)
    AL096814, AL512274, KF458156
    Consensus CDS
    CCDS47428.1
    UniProtKB/Swiss-Prot
    Q5T0Z8
    Related
    ENSP00000341368.4, ENST00000341865.9
    Conserved Domains (2) summary
    PTZ00249
    Location:251386
    PTZ00249; variable surface protein Vir28; Provisional
    PHA03247
    Location:6181035
    PHA03247; large tegument protein UL36; Provisional

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    42101119..42142620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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