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PDCD6IPP2 PDCD6IP pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 646278, updated on 23-Nov-2021

Summary

Official Symbol
PDCD6IPP2provided by HGNC
Official Full Name
PDCD6IP pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:49873
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 7.5), colon (RPKM 5.7) and 25 other tissues See more
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Genomic context

See PDCD6IPP2 in Genome Data Viewer
Location:
15q13.1
Exon count:
14
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (28789834..28856574)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (29034980..29101720)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene zinc finger FYVE-type containing 9 pseudogene Neighboring gene Dexi homolog (mouse) pseudogene Neighboring gene C-X9-C motif containing 2 pseudogene Neighboring gene golgin A6 family like 7 Neighboring gene ferritin light chain pseudogene 11 Neighboring gene amyloid beta precursor protein binding family A member 2 Neighboring gene family with sequence similarity 189 member A1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037599.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC055876, AC174071

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    28789834..28856574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p13 PATCHES

    Range
    951840..1018559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p13 ALT_REF_LOCI_2

    Range
    1065626..1077308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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