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LINC01704 long intergenic non-protein coding RNA 1704 [ Homo sapiens (human) ]

Gene ID: 646268, updated on 13-May-2022

Summary

Official Symbol
LINC01704provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1704provided by HGNC
Primary source
HGNC:HGNC:52492
See related
Ensembl:ENSG00000231666 AllianceGenome:HGNC:52492
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.0) See more
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Genomic context

See LINC01704 in Genome Data Viewer
Location:
1q23.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (158132044..158140640, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (157269132..157277737, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (158101834..158110430, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene kirre like nephrin family adhesion molecule 1 Neighboring gene KIRREL1 intronic transcript 1 Neighboring gene uncharacterized LOC105371460 Neighboring gene small integral membrane protein 42 Neighboring gene elongation factor for RNA polymerase II 2 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033946.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL138899, BC029599, DB032996
    Related
    ENST00000414848.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    158132044..158140640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    157269132..157277737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)