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RPL13AP3 ribosomal protein L13a pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 645683, updated on 11-Apr-2024

Summary

Official Symbol
RPL13AP3provided by HGNC
Official Full Name
ribosomal protein L13a pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:23539
See related
Ensembl:ENSG00000293056 AllianceGenome:HGNC:23539
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL13A_11_1370
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
14q22.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (55766161..55767717)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (49971925..49973481)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (56232879..56234435)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5786 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5785 Neighboring gene Sharpr-MPRA regulatory region 13870 Neighboring gene kinectin 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:56166391-56166991 Neighboring gene uncharacterized LOC124903320 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:56219189-56219804 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:56220358-56220908 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:56219806-56220357 Neighboring gene long intergenic non-protein coding RNA 520 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr14:56270173-56271372 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:56280398-56281597 Neighboring gene Sharpr-MPRA regulatory region 10894 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:56328264-56328764 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:56332166-56332666 Neighboring gene uncharacterized LOC105370511

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC87657

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus HDA PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_004844.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL355773
    Related
    ENST00000494676.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    55766161..55767717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    49971925..49973481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)