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WFDC21P WAP four-disulfide core domain 21, pseudogene [ Homo sapiens (human) ]

Gene ID: 645638, updated on 13-May-2022

Summary

Official Symbol
WFDC21Pprovided by HGNC
Official Full Name
WAP four-disulfide core domain 21, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:50357
See related
Ensembl:ENSG00000261040 MIM:615772; AllianceGenome:HGNC:50357
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LNCDC; lnc-DC; linc-DC
Summary
Predicted to enable enzyme activator activity. Predicted to act upstream of or within response to lipopolysaccharide; response to tumor necrosis factor; and white fat cell differentiation. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in esophagus (RPKM 17.0), skin (RPKM 14.1) and 7 other tissues See more
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Genomic context

See WFDC21P in Genome Data Viewer
Location:
17q23.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (60083566..60088467, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (60952521..60957422, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (58160927..58165828, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 6 Neighboring gene microRNA 4737 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 1 pseudogene Neighboring gene HEATR6 divergent transcript Neighboring gene adaptor related protein complex 1 subunit sigma 2 pseudogene Neighboring gene uncharacterized LOC100996660

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • WDNM1-like pseudogene
  • lnc-dendritic cell lncRNA
  • long non-coding RNA, dendritic cell differentiation

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030732.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC025048
    Related
    ENST00000566140.6

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    60083566..60088467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    60952521..60957422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)