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PAK6-AS1 PAK6 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 644809, updated on 13-May-2022

Summary

Official Symbol
PAK6-AS1provided by HGNC
Official Full Name
PAK6 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:33868
See related
Ensembl:ENSG00000176753 AllianceGenome:HGNC:33868
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C15orf56
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See PAK6-AS1 in Genome Data Viewer
Location:
15q15.1
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (40250664..40252959, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (38057548..38059843, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (40542865..40545160, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene MT-ND4 pseudogene 37 Neighboring gene uncharacterized LOC107984763 Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase B Neighboring gene BUB1B-PAK6 readthrough Neighboring gene p21 (RAC1) activated kinase 6 Neighboring gene ankyrin repeat domain 63 Neighboring gene phospholipase C beta 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ38596

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168270.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020658
    Related
    ENST00000623360.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    40250664..40252959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    38057548..38059843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039905.2: Suppressed sequence

    Description
    NM_001039905.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.