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CDRT15P2 CDRT15 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 644694, updated on 25-Jan-2022

Summary

Official Symbol
CDRT15P2provided by HGNC
Official Full Name
CDRT15 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:34074
See related
AllianceGenome:HGNC:34074
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CDRT15L1
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Restricted expression toward testis (RPKM 4.4) See more
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Genomic context

See CDRT15P2 in Genome Data Viewer
Location:
17p12
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (15764703..15765689)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (15668017..15669003)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ZNF286A-TBC1D26 readthrough (NMD candidate) Neighboring gene TBC1D26 antisense RNA 1 Neighboring gene TBC1 domain family member 26 Neighboring gene uncharacterized LOC105371559 Neighboring gene zinc finger SWIM-type containing 5 pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 436

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • CMT1A duplicated region transcript 15 pseudogene 2
  • CMT1A duplicated region transcript 15-like 1

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033865.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005324, AC015922

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    15764703..15765689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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