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12 pre-neck appendage protein [ Bacillus phage phi29 ]

Gene ID: 6446499, updated on 18-Aug-2023

Summary

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Gene symbol
12
Gene description
pre-neck appendage protein
Locus tag
phi29_gp12
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus phage phi29 (nat-host: Bacillus subtilis)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Salasmaviridae; Picovirinae; Salasvirus
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Genomic context

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Sequence:
NC_011048.1 (11371..13935)

NC_011048.1Genomic Context describing neighboring genes Neighboring gene tail protein Neighboring gene upper collar connector Neighboring gene adaptor Ad4 Neighboring gene tail-type lysozyme domain-containing protein Neighboring gene holin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011048.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike. Xiang Y, et al. Mol Cell, 2009 May 15. PMID 19450535, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pre-neck appendage protein
YP_002004541.1
  • similar to NP_040730.1 pre-neck appendage protein Bacillus phage PZA, NP_690646.1 pre-neck appendage protein Bacillus phage B103

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011048.1 Reference assembly

    Range
    11371..13935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002004541.1 pre-neck appendage protein [Bacillus phage phi29]

    See identical proteins and their annotated locations for YP_002004541.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B3VMP8, P20345
    Conserved Domains (3) summary
    pfam11962
    Location:643 → 854
    Peptidase_G2; Peptidase_G2, IMC autoproteolytic cleavage domain
    pfam12708
    Location:105 → 333
    Pectate_lyase_3; Pectate lyase superfamily protein
    cl19188
    Location:218 → 329
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
Heading Accession and Version

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