U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BCRP3 BCR pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 644165, updated on 13-May-2022

Summary

Official Symbol
BCRP3provided by HGNC
Official Full Name
BCR pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:1016
See related
AllianceGenome:HGNC:1016
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BCR3; BCRL3; BCRL6
Expression
Broad expression in testis (RPKM 23.3), kidney (RPKM 6.9) and 22 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See BCRP3 in Genome Data Viewer
Location:
22q11.23
Exon count:
7
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (24632915..24653360)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (25094366..25114811)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (25028882..25049327)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905091 Neighboring gene leucine rich repeat containing 75B Neighboring gene gamma-glutamyltransferase 1 Neighboring gene POM121 transmembrane nucleoporin like 10, pseudogene Neighboring gene actin related protein 2 pseudogene Neighboring gene uncharacterized LOC124905092 Neighboring gene ARL5A pseudogene 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study identifies three novel susceptibility loci for severe Acne vulgaris.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • breakpoint cluster region pseudogene 3
  • breakpoint cluster region-like 3
  • breakpoint cluster region-like 6

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024494.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK297038, AW193769, BM920079, BX090183, DB345226

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    24632915..24653360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    25094366..25114811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)