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GLYCAM1 glycosylation dependent cell adhesion molecule 1 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 644076, updated on 5-Jan-2022

Summary

Official Symbol
GLYCAM1provided by HGNC
Official Full Name
glycosylation dependent cell adhesion molecule 1 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:18023
See related
Ensembl:ENSG00000257780
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable cell adhesion molecule binding activity and sulfate binding activity. Predicted to act upstream of or within response to bacterium. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2021]
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Genomic context

See GLYCAM1 in Genome Data Viewer
Location:
12q13.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (54608187..54610462, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (55001971..55004246, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 1B Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1A Neighboring gene lacritin Neighboring gene dermcidin

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • glycosylation-dependent cell adhesion molecule 1

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in plasma membrane TAS
Traceable Author Statement
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003039.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079310, KF459782
    Related
    ENST00000550226.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    54608187..54610462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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