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CTAGE9 CTAGE family member 9 [ Homo sapiens (human) ]

Gene ID: 643854, updated on 22-Sep-2022

Summary

Official Symbol
CTAGE9provided by HGNC
Official Full Name
CTAGE family member 9provided by HGNC
Primary source
HGNC:HGNC:37275
See related
Ensembl:ENSG00000236761 AllianceGenome:HGNC:37275
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; protein secretion; and vesicle cargo loading. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum exit site and endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See CTAGE9 in Genome Data Viewer
Location:
6q23.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (131708441..131711017, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (132902914..132905490, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (132029581..132032157, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene RNA, U4 small nuclear 18, pseudogene Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 3 Neighboring gene olfactory receptor family 2 subfamily A member 4 Neighboring gene ribosomal protein L15 pseudogene 9 Neighboring gene microRNA 548h-5

Genomic regions, transcripts, and products

General protein information

Preferred Names
cTAGE family member 9
Names
cutaneous T-cell lymphoma-associated antigen 9
protein cTAGE-9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145659.1NP_001139131.1  cTAGE family member 9

    See identical proteins and their annotated locations for NP_001139131.1

    Status: VALIDATED

    Source sequence(s)
    AC005587
    Consensus CDS
    CCDS47475.1
    UniProtKB/Swiss-Prot
    A4FU28
    Related
    ENSP00000395587.2, ENST00000314099.10
    Conserved Domains (4) summary
    pfam04156
    Location:43188
    IncA; IncA protein
    pfam07926
    Location:123244
    TPR_MLP1_2; TPR/MLP1/MLP2-like protein
    pfam10211
    Location:157229
    Ax_dynein_light; Axonemal dynein light chain
    pfam15233
    Location:338445
    SYCE1; Synaptonemal complex central element protein 1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    131708441..131711017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    132902914..132905490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)