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TMEM232 transmembrane protein 232 [ Homo sapiens (human) ]

Gene ID: 642987, updated on 30-Nov-2022

Summary

Official Symbol
TMEM232provided by HGNC
Official Full Name
transmembrane protein 232provided by HGNC
Primary source
HGNC:HGNC:37270
See related
Ensembl:ENSG00000186952 MIM:620143; AllianceGenome:HGNC:37270
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis (RPKM 2.0), thyroid (RPKM 0.4) and 6 other tissues See more
Orthologs
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Genomic context

See TMEM232 in Genome Data Viewer
Location:
5q22.1
Exon count:
28
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (110387431..110738954, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (110930026..111237256, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (109755197..110062372, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379119 Neighboring gene Sharpr-MPRA regulatory region 2532 Neighboring gene microRNA 548f-3 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene solute carrier family 25 member 46 Neighboring gene integrin alpha FG-GAP repeat containing 2 pseudogene Neighboring gene BCL2 associated transcription factor 1 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order.
EBI GWAS Catalog
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ35903, FLJ43080, DKFZp686G0585

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039763.4NP_001034852.3  transmembrane protein 232

    See identical proteins and their annotated locations for NP_001034852.3

    Status: VALIDATED

    Source sequence(s)
    AC010349, AK296542, BM465182
    Consensus CDS
    CCDS47253.2
    UniProtKB/Swiss-Prot
    B4DKF4, C9JQI7
    Related
    ENSP00000401477.2, ENST00000455884.7
    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    110387431..110738954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011543565.4XP_011541867.1  transmembrane protein 232 isoform X11

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  2. XM_047417493.1XP_047273449.1  transmembrane protein 232 isoform X7

  3. XM_006714670.4XP_006714733.1  transmembrane protein 232 isoform X1

    See identical proteins and their annotated locations for XP_006714733.1

    UniProtKB/Swiss-Prot
    B4DKF4, C9JQI7
    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  4. XM_011543555.3XP_011541857.1  transmembrane protein 232 isoform X2

    See identical proteins and their annotated locations for XP_011541857.1

    Conserved Domains (1) summary
    pfam15877
    Location:23466
    TMEM232; Transmembrane protein family 232
  5. XM_011543552.3XP_011541854.1  transmembrane protein 232 isoform X1

    See identical proteins and their annotated locations for XP_011541854.1

    UniProtKB/Swiss-Prot
    B4DKF4, C9JQI7
    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  6. XM_011543556.3XP_011541858.1  transmembrane protein 232 isoform X2

    See identical proteins and their annotated locations for XP_011541858.1

    Conserved Domains (1) summary
    pfam15877
    Location:23466
    TMEM232; Transmembrane protein family 232
  7. XM_011543553.3XP_011541855.1  transmembrane protein 232 isoform X1

    See identical proteins and their annotated locations for XP_011541855.1

    UniProtKB/Swiss-Prot
    B4DKF4, C9JQI7
    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  8. XM_047417495.1XP_047273451.1  transmembrane protein 232 isoform X12

  9. XM_011543560.3XP_011541862.1  transmembrane protein 232 isoform X7

    Conserved Domains (1) summary
    pfam15877
    Location:1367
    TMEM232; Transmembrane protein family 232
  10. XM_047417492.1XP_047273448.1  transmembrane protein 232 isoform X6

  11. XM_047417491.1XP_047273447.1  transmembrane protein 232 isoform X4

  12. XM_011543559.3XP_011541861.1  transmembrane protein 232 isoform X5

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  13. XM_047417494.1XP_047273450.1  transmembrane protein 232 isoform X8

  14. XM_011543561.3XP_011541863.1  transmembrane protein 232 isoform X8

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  15. XM_011543563.3XP_011541865.1  transmembrane protein 232 isoform X10

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  16. XM_011543557.3XP_011541859.1  transmembrane protein 232 isoform X3

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  17. XM_017009706.3XP_016865195.1  transmembrane protein 232 isoform X9

  18. XM_017009705.3XP_016865194.1  transmembrane protein 232 isoform X3

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232
  19. XM_011543567.4XP_011541869.1  transmembrane protein 232 isoform X13

    Conserved Domains (1) summary
    pfam15877
    Location:42485
    TMEM232; Transmembrane protein family 232

RNA

  1. XR_001742182.2 RNA Sequence

  2. XR_001742181.2 RNA Sequence

  3. XR_007058620.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    110930026..111237256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)