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FRG1JP FSHD region gene 1 family member J, pseudogene [ Homo sapiens (human) ]

Gene ID: 642236, updated on 12-Oct-2019

Summary

Official Symbol
FRG1JPprovided by HGNC
Official Full Name
FSHD region gene 1 family member J, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:51768
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in prostate (RPKM 2.2), spleen (RPKM 2.0) and 25 other tissues See more

Genomic context

See FRG1JP in Genome Data Viewer
Location:
9q13
Exon count:
9
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (63832050..63859634, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (68427783..68454375, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 537 Neighboring gene microRNA 4477b Neighboring gene double homeobox 4 like 50 (pseudogene) Neighboring gene COBW domain containing 3 pseudogene Neighboring gene asparagine synthetase pseudogene Neighboring gene MT-CO3 pseudogene 36

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • FSHD region gene 1 pseudogene
  • NB - could be FRG1IP depending on decision re FRG1H/P

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033907.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BG282219, BM979847, BU619828, CR786580, DA268615, DB141416

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    63832050..63859634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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