Format

Send to:

Choose Destination

TSC22D1-AS1 TSC22D1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 641467, updated on 11-Jun-2021

Summary

Official Symbol
TSC22D1-AS1provided by HGNC
Official Full Name
TSC22D1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:43684
See related
Ensembl:ENSG00000278156
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 5.4), brain (RPKM 3.8) and 24 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TSC22D1-AS1 in Genome Data Viewer
Location:
13q14.11
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (44575896..44580432)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (45150032..45154568)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene stress associated endoplasmic reticulum protein family member 2 Neighboring gene tumor suppressor candidate 8 Neighboring gene TSC22 domain family member 1 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 5 Neighboring gene long intergenic non-protein coding RNA 407 Neighboring gene uncharacterized LOC105370185

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • TSC22D1 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038381.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL356107, BC040675
    Related
    ENST00000616360.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    44575896..44580432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center