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Ighv5-9-1 immunoglobulin heavy variable 5-9-1 [ Mus musculus (house mouse) ]

Gene ID: 641178, updated on 2-Nov-2024

Summary

Official Symbol
Ighv5-9-1provided by MGI
Official Full Name
immunoglobulin heavy variable 5-9-1provided by MGI
Primary source
MGI:MGI:4439810
See related
IMGT/GENE-DB:IGHV5-9-1; AllianceGenome:MGI:4439810
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm16886
Summary
Predicted to enable antigen binding activity. Predicted to be involved in immunoglobulin mediated immune response. Orthologous to several human genes including IGHV3-23 (immunoglobulin heavy variable 3-23); IGHV3-35 (immunoglobulin heavy variable 3-35 (non-functional)); and IGHV3-38 (immunoglobulin heavy variable 3-38 (non-functional)). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Ighv5-9-1 in Genome Data Viewer
Location:
12 F1; 12 62.17 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (113699733..113700026, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (113736113..113736406, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin heavy chain complex Neighboring gene immunoglobulin heavy variable 5-12-4 Neighboring gene immunoglobulin heavy variable 5-12 Neighboring gene immunoglobulin heavy variable 2-9-1 Neighboring gene immunoglobulin heavy variable 2-6

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005838.1 

    Range
    488517..488810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    113699733..113700026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)