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MAGEF1 MAGE family member F1 [ Homo sapiens (human) ]

Gene ID: 64110, updated on 19-Sep-2024

Summary

Official Symbol
MAGEF1provided by HGNC
Official Full Name
MAGE family member F1provided by HGNC
Primary source
HGNC:HGNC:29639
See related
Ensembl:ENSG00000177383 MIM:609267; AllianceGenome:HGNC:29639
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MAGE-F1
Summary
This intronless gene encodes a member of the MAGE superfamily. It is ubiquitously expressed in normal tissues and in tumor cells. This gene includes a microsatellite repeat in the coding region. [provided by RefSeq, Jul 2008]
Orthologs
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Genomic context

See MAGEF1 in Genome Data Viewer
Location:
3q27.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (184710364..184712064, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (187525551..187527254, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (184428152..184429852, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909469 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14968 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14969 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184281553-184282305 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184285640-184286154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184286155-184286667 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184287010-184287956 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184287957-184288903 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184293707-184294309 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:184300020-184300586 Neighboring gene EPH receptor B3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184300606-184301122 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184301123-184301638 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184301639-184302154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184311799-184312421 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184312422-184313043 Neighboring gene Sharpr-MPRA regulatory region 3316 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184321402-184322134 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184327579-184328080 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184330970-184331470 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184331471-184331971 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184347519-184348190 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20912 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:184377157-184378119 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:184378120-184379081 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184381274-184381774 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184381775-184382275 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184390575-184391076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184396441-184396946 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184395936-184396440 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184407744-184408244 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184408245-184408745 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20913 Neighboring gene uncharacterized LOC107986163 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184458434-184458952 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:184463957-184464458 Neighboring gene long intergenic non-protein coding RNA 2069

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
melanoma-associated antigen F1
Names
MAGE-F1 antigen
melanoma antigen family F, 1
melanoma antigen family F1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022149.5NP_071432.2  melanoma-associated antigen F1

    See identical proteins and their annotated locations for NP_071432.2

    Status: REVIEWED

    Source sequence(s)
    AC107294, BC010056, BQ058163, BQ070043
    Consensus CDS
    CCDS3269.1
    UniProtKB/Swiss-Prot
    Q9H215, Q9HAY2
    Related
    ENSP00000315064.3, ENST00000317897.5
    Conserved Domains (1) summary
    pfam01454
    Location:83252
    MAGE; MAGE family

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    184710364..184712064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    187525551..187527254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)