Format

Send to:

Choose Destination

DMRTC1 DMRT like family C1 [ Homo sapiens (human) ]

Gene ID: 63947, updated on 8-Jul-2021

Summary

Official Symbol
DMRTC1provided by HGNC
Official Full Name
DMRT like family C1provided by HGNC
Primary source
HGNC:HGNC:13910
See related
Ensembl:ENSG00000269502 MIM:300878
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in brain (RPKM 5.5), ovary (RPKM 3.3) and 12 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See DMRTC1 in Genome Data Viewer
Location:
Xq13.1
Exon count:
7
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (72872025..72943837, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (72091859..72163676, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene DMRT like family C1B Neighboring gene family with sequence similarity 236 member B Neighboring gene family with sequence similarity 236 member D Neighboring gene family with sequence similarity 236 member C Neighboring gene family with sequence similarity 235 member A Neighboring gene family with sequence similarity 226 member A Neighboring gene PABPC1L2B antisense RNA 1 (head to head) Neighboring gene poly(A) binding protein cytoplasmic 1 like 2B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chromatin ISA
Inferred from Sequence Alignment
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
doublesex- and mab-3-related transcription factor C1
Names
doublesex-mab-3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386923.1NP_001373852.1  doublesex- and mab-3-related transcription factor C1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC234776
    Conserved Domains (1) summary
    pfam15791
    Location:46164
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2
  2. NM_001386924.1NP_001373853.1  doublesex- and mab-3-related transcription factor C1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC234776
    Conserved Domains (1) summary
    pfam15791
    Location:46164
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2
  3. NM_033053.3NP_149042.2  doublesex- and mab-3-related transcription factor C1 isoform 1

    See identical proteins and their annotated locations for NP_149042.2

    Status: VALIDATED

    Source sequence(s)
    AC234776
    Consensus CDS
    CCDS35333.2
    UniProtKB/Swiss-Prot
    Q5HYR2
    UniProtKB/TrEMBL
    A0A024R4F7
    Related
    ENSP00000484718.2, ENST00000615063.2
    Conserved Domains (1) summary
    pfam15791
    Location:73191
    DMRT-like; Doublesex-and mab-3-related transcription factor C1 and C2

RNA

  1. NR_170342.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC234776
    Related
    ENST00000622727.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    72872025..72943837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center