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LINC01749 long intergenic non-protein coding RNA 1749 [ Homo sapiens (human) ]

Gene ID: 63930, updated on 23-Nov-2021

Summary

Official Symbol
LINC01749provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1749provided by HGNC
Primary source
HGNC:HGNC:52537
See related
Ensembl:ENSG00000272259
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01749 in Genome Data Viewer
Location:
20q13.33
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (63009383..63085071)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (61640735..61716423)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 9 Neighboring gene basic helix-loop-helix family member e23 Neighboring gene uncharacterized LOC105372718 Neighboring gene long intergenic non-protein coding RNA 29 Neighboring gene long intergenic non-protein coding RNA 1056 Neighboring gene highly accelerated region 1B Neighboring gene uncharacterized LOC105372719 Neighboring gene highly accelerated region 1A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
A genome-wide search for loci interacting with known prostate cancer risk-associated genetic variants.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033370.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AL121673
    Related
    ENST00000607802.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    63009383..63085071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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