Format

Send to:

Choose Destination

HEATR6 HEAT repeat containing 6 [ Homo sapiens (human) ]

Gene ID: 63897, updated on 1-Jun-2020

Summary

Official Symbol
HEATR6provided by HGNC
Official Full Name
HEAT repeat containing 6provided by HGNC
Primary source
HGNC:HGNC:24076
See related
Ensembl:ENSG00000068097
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ABC1
Expression
Ubiquitous expression in ovary (RPKM 3.1), testis (RPKM 3.0) and 25 other tissues See more
Orthologs

Genomic context

See HEATR6 in Genome Data Viewer
Location:
17q23.1
Exon count:
20
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (60041008..60078921, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (58118790..58156292, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene TBC1D3P1-DHX40P1 readthrough, transcribed pseudogene Neighboring gene TBC1 domain family member 3 pseudogene 1 Neighboring gene uncharacterized LOC105371848 Neighboring gene microRNA 4737 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 1 pseudogene Neighboring gene uncharacterized LOC105371849 Neighboring gene WAP four-disulfide core domain 21, pseudogene Neighboring gene adaptor related protein complex 1 sigma 2 subunit pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ22087, MGC148096, DKFZp686D22141

General protein information

Preferred Names
HEAT repeat-containing protein 6
Names
amplified in breast cancer 1
amplified in breast cancer protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022070.5NP_071353.4  HEAT repeat-containing protein 6

    See identical proteins and their annotated locations for NP_071353.4

    Status: VALIDATED

    Source sequence(s)
    AC005702, AC025048
    Consensus CDS
    CCDS11623.1
    UniProtKB/Swiss-Prot
    Q6AI08
    Related
    ENSP00000184956.5, ENST00000184956.11
    Conserved Domains (3) summary
    pfam13251
    Location:418599
    DUF4042; Domain of unknown function (DUF4042)
    pfam13513
    Location:830883
    HEAT_EZ; HEAT-like repeat
    sd00044
    Location:810843
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    60041008..60078921 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center