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PtrM4_041130 AhpC, Peroxiredoxin [ Pyrenophora tritici-repentis ]

Gene ID: 6345536, updated on 10-Jul-2024
Gene symbol
PtrM4_041130
Gene description
AhpC, Peroxiredoxin
Locus tag
PtrM4_041130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pyrenophora tritici-repentis (strain: M4, nat-host: Triticum aestivum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora
Old locus tag
PTRG_07264
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See PtrM4_041130 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Sequence:
Chromosome: 10; NC_089399.1 (749607..750459)

Chromosome 10 - NC_089399.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat protein Neighboring gene putative mfs multidrug protein Neighboring gene TolA, Membrane protein involved in colicin uptake Neighboring gene hypothetical protein

Genomic Sequence:
NC_089399.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity. Moolhuijzen P, et al. BMC Genomics, 2018 Apr 23. PMID 29685100, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peroxiredoxin activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
AhpC, Peroxiredoxin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089399.1 Reference assembly

    Range
    749607..750459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001937561.2 → XP_001937596.1  AhpC, Peroxiredoxin [Pyrenophora tritici-repentis]

    See identical proteins and their annotated locations for XP_001937596.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2W1EUK9, B2WAF1
    Conserved Domains (1) summary
    cd03016
    Location:10 → 218
    PRX_1cys; Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by ...
Nucleotide Protein
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