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Cd101 CD101 antigen [ Mus musculus (house mouse) ]

Gene ID: 630146, updated on 26-Sep-2022

Summary

Official Symbol
Cd101provided by MGI
Official Full Name
CD101 antigenprovided by MGI
Primary source
MGI:MGI:2685862
See related
Ensembl:ENSMUSG00000086564 AllianceGenome:MGI:2685862
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm734; Igsf2; Gm1016; EWI-101
Summary
Acts upstream of or within positive regulation of myeloid leukocyte differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CD101 (CD101 molecule). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in spleen adult (RPKM 1.1), lung adult (RPKM 0.8) and 12 other tissues See more
Orthologs
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Genomic context

See Cd101 in Genome Data Viewer
Location:
3; 3 F2.2
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (100899505..100936869, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (100992189..101029553, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing 45 Neighboring gene transcription termination factor, RNA polymerase II Neighboring gene prostaglandin F2 receptor negative regulator Neighboring gene nuclear import 7 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (3) 

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
immunoglobulin superfamily member 2
Names
EWI immunoglobulin subfamily member EWI-101
glu-Trp-Ile EWI motif-containing protein 101
immunoglobulin superfamily, member 2
leukocyte surface protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167906.2NP_001161378.1  immunoglobulin superfamily member 2 precursor

    See identical proteins and their annotated locations for NP_001161378.1

    Status: VALIDATED

    Source sequence(s)
    AL669872
    Consensus CDS
    CCDS51020.1
    UniProtKB/Swiss-Prot
    A8E0Y8, A8E0Y9
    Related
    ENSMUSP00000116643.3, ENSMUST00000147399.9
    Conserved Domains (5) summary
    cd00096
    Location:300391
    Ig; Immunoglobulin domain
    smart00410
    Location:29142
    IG_like; Immunoglobulin like
    pfam00047
    Location:421515
    ig; Immunoglobulin domain
    pfam07686
    Location:26143
    V-set; Immunoglobulin V-set domain
    cl11960
    Location:831927
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    100899505..100936869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001099332.2: Suppressed sequence

    Description
    NM_001099332.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.