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S100a2 S100 calcium binding protein A2 [ Mus musculus (house mouse) ]

Gene ID: 628324, updated on 8-Dec-2022

Summary

Official Symbol
S100a2provided by MGI
Official Full Name
S100 calcium binding protein A2provided by MGI
Primary source
MGI:MGI:3510999
See related
Ensembl:ENSMUSG00000094018 AllianceGenome:MGI:3510999
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CaN19; S100L; EG628324
Summary
Predicted to enable calcium ion binding activity; calcium-dependent protein binding activity; and identical protein binding activity. Predicted to be involved in endothelial cell migration. Orthologous to human S100A2 (S100 calcium binding protein A2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See S100a2 in Genome Data Viewer
Location:
3; 3 F1
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (90497554..90498815)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (90590247..90591508)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23464 Neighboring gene S100 calcium binding protein A3 Neighboring gene predicted gene, 54169 Neighboring gene S100 calcium binding protein A4 Neighboring gene S100 calcium binding protein A5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in endothelial cell migration IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in endothelial cell migration ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC628324

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195760.1NP_001182689.1  uncharacterized protein LOC628324

    Status: PREDICTED

    Source sequence(s)
    AC160552
    Consensus CDS
    CCDS57224.1
    UniProtKB/TrEMBL
    J3QMC7
    Related
    ENSMUSP00000136224.2, ENSMUST00000179550.2
    Conserved Domains (1) summary
    cl08302
    Location:169
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    90497554..90498815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)