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Wdr93 WD repeat domain 93 [ Mus musculus (house mouse) ]

Gene ID: 626359, updated on 26-Sep-2022

Summary

Official Symbol
Wdr93provided by MGI
Official Full Name
WD repeat domain 93provided by MGI
Primary source
MGI:MGI:3646885
See related
Ensembl:ENSMUSG00000039099 AllianceGenome:MGI:3646885
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG626359
Summary
Predicted to enable oxidoreductase activity, acting on NAD(P)H. Predicted to be involved in electron transport chain. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human WDR93 (WD repeat domain 93). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 11.5), subcutaneous fat pad adult (RPKM 1.7) and 3 other tissues See more
Orthologs
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Genomic context

See Wdr93 in Genome Data Viewer
Location:
7 D2; 7
Exon count:
20
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (79392882..79435700)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (79742948..79785952)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene perilipin 1 Neighboring gene peroxisomal biogenesis factor 11 alpha Neighboring gene predicted gene 44705 Neighboring gene mesoderm posterior 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in electron transport chain IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of mitochondrial respiratory chain complex I IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
WD repeat-containing protein 93

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037927.1NP_001033016.1  WD repeat-containing protein 93 isoform 1

    See identical proteins and their annotated locations for NP_001033016.1

    Status: VALIDATED

    Source sequence(s)
    AB205021
    Consensus CDS
    CCDS39992.1
    UniProtKB/Swiss-Prot
    B9EKH5, Q402B2
    Related
    ENSMUSP00000037467.8, ENSMUST00000035622.8
  2. NM_001381990.1NP_001368919.1  WD repeat-containing protein 93 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC109221, AC158582
    UniProtKB/Swiss-Prot
    B9EKH5
  3. NM_001381991.1NP_001368920.1  WD repeat-containing protein 93 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC109221, AC158582
  4. NM_001381992.1NP_001368921.1  WD repeat-containing protein 93 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC109221, AC158582
    UniProtKB/Swiss-Prot
    B9EKH5

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    79392882..79435700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006541049.4XP_006541112.1  WD repeat-containing protein 93 isoform X1

    See identical proteins and their annotated locations for XP_006541112.1

    UniProtKB/Swiss-Prot
    B9EKH5, Q402B2
  2. XM_030242854.1XP_030098714.1  WD repeat-containing protein 93 isoform X1

    UniProtKB/Swiss-Prot
    B9EKH5
  3. XM_036153317.1XP_036009210.1  WD repeat-containing protein 93 isoform X2