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EKO05_0000550 Thioredoxin-dependent peroxiredoxin [ Ascochyta rabiei ]

Gene ID: 62210089, updated on 18-Oct-2023
Gene symbol
EKO05_0000550
Gene description
Thioredoxin-dependent peroxiredoxin
Locus tag
EKO05_0000550
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ascochyta rabiei (isolate: Me14, nat-host: Cicer arietinum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Didymellaceae; Ascochyta
Old locus tag
EKO05_000549
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See EKO05_0000550 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_082405.1 (1873832..1874656, complement)

Chromosome 1 - NC_082405.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene RNA helicase Neighboring gene uncharacterized protein Neighboring gene Type IV protein arginine methyltransferase

Genomic Sequence:
NC_082405.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Reference Genome Assembly for Australian Ascochyta rabiei Isolate ArME14. Shah RM, et al. G3 (Bethesda), 2020 Jul 7. PMID 32345704, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thioredoxin peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
Thioredoxin-dependent peroxiredoxin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_082405.1 Reference assembly

    Range
    1873832..1874656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038936801.1 → XP_038803091.1  Thioredoxin-dependent peroxiredoxin [Ascochyta rabiei]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A163HJI9
    Conserved Domains (1) summary
    cd03016
    Location:45 → 252
    PRX_1cys; Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by ...
Nucleotide Protein
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