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FOA43_003682 uncharacterized protein [ Brettanomyces nanus ]

Gene ID: 62197082, updated on 7-Dec-2023

Summary

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Gene symbol
FOA43_003682
Gene description
uncharacterized protein
Locus tag
FOA43_003682
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brettanomyces nanus (strain: CBS 1945, culture-collection: AWRI:2847, type-material: type material of Eeniella nana)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Brettanomyces
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_052377.1 (990054..992990)

Chromosome 4 - NC_052377.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene DNA-directed RNA polymerase II core subunit rpb9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052377.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_038779861.1
  • BUSCO:EOG09340XO6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_052377.1 Reference assembly

    Range
    990054..992990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038923933.1 → XP_038779861.1  uncharacterized protein FOA43_003682 [Brettanomyces nanus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A875S4R8
    Conserved Domains (3) summary
    PRK10590
    Location:118 → 536
    PRK10590; ATP-dependent RNA helicase RhlE; Provisional
    cd17959
    Location:117 → 321
    DEADc_DDX54; DEAD-box helicase domain of DEAD box protein 54
    pfam08147
    Location:813 → 870
    DBP10CT; DBP10CT (NUC160) domain
Nucleotide Protein
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Molecular Biology Databases