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Bind_0382 DNA ligase D [ Beijerinckia indica subsp. indica ATCC 9039 ]

Gene ID: 6199130, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
Bind_0382
Gene description
DNA ligase D
Locus tag
Bind_0382
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Beijerinckia indica subsp. indica ATCC 9039 (strain: ATCC 9039, sub-species: indica, other: type strain of Beijerinckia indica subsp. indica)
Lineage
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA ligase D
YP_001831524.1
  • TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein
    PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
    KEGG: mes:Meso_1150 ATP dependent DNA ligase

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010581.1 Reference assembly

    Range
    440927..442861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001831524.1 DNA ligase D [Beijerinckia indica subsp. indica ATCC 9039]

    Status: PROVISIONAL

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