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LINC00589 long intergenic non-protein coding RNA 589 [ Homo sapiens (human) ]

Gene ID: 619351, updated on 13-May-2022

Summary

Official Symbol
LINC00589provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 589provided by HGNC
Primary source
HGNC:HGNC:32299
See related
Ensembl:ENSG00000251191 AllianceGenome:HGNC:32299
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TSLNC8; C8orf75
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00589 in Genome Data Viewer
Location:
8p12
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (29721259..29748109, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (29999676..30026511, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (29578775..29605625, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein L17 pseudogene 33 Neighboring gene uncharacterized LOC124901926 Neighboring gene long intergenic non-protein coding RNA 2099 Neighboring gene uncharacterized LOC101929470

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • tumor suppressor lncRNA on chromosome 8p12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026765.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC069181, BC014230
    Related
    ENST00000506121.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    29721259..29748109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    29999676..30026511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)