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GIPC3 GIPC PDZ domain containing family member 3 [ Bos taurus (cattle) ]

Gene ID: 618265, updated on 14-Jan-2019

Summary

Gene symbol
GIPC3
Gene description
GIPC PDZ domain containing family member 3
See related
BGD:BT19126; Ensembl:ENSBTAG00000050809
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs

Genomic context

See GIPC3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 7 NC_037334.1 (20343708..20350057, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 7 AC_000164.1 (21580258..21581780)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447367 Neighboring gene cactin, spliceosome C complex subunit Neighboring gene uncharacterized LOC112447366 Neighboring gene thromboxane A2 receptor Neighboring gene uncharacterized LOC112447368 Neighboring gene uncharacterized LOC100849681 Neighboring gene high mobility group 20B Neighboring gene major facilitator superfamily domain containing 12

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
PDZ domain-containing protein GIPC3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206294.1NP_001193223.1  PDZ domain-containing protein GIPC3

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000007
    Related
    ENSBTAP00000067132.1, ENSBTAT00000068002.1
    Conserved Domains (1) summary
    cd00992
    Location:116189
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    20343708..20350057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024994634.1XP_024850402.1  PDZ domain-containing protein GIPC3 isoform X1

    Conserved Domains (2) summary
    cd00992
    Location:116189
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl26464
    Location:9061219
    Atrophin-1; Atrophin-1 family
  2. XM_024994635.1XP_024850403.1  PDZ domain-containing protein GIPC3 isoform X2

    Conserved Domains (2) summary
    cd00992
    Location:67140
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl26464
    Location:8571170
    Atrophin-1; Atrophin-1 family
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