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CERS6 ceramide synthase 6 [ Bos taurus (cattle) ]

Gene ID: 616901, updated on 4-Jul-2020

Summary

Official Symbol
CERS6provided by VGNC
Official Full Name
ceramide synthase 6provided by VGNC
Primary source
VGNC:VGNC:27228
See related
BGD:BT20214; Ensembl:ENSBTAG00000044179
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
LASS6
Orthologs
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Genomic context

See CERS6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 2 NC_037329.1 (27353327..27712377, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 2 AC_000159.1 (27407917..27653182, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene nitric oxide synthase trafficking Neighboring gene SPC25 component of NDC80 kinetochore complex Neighboring gene microRNA mir-2353 Neighboring gene serine/threonine kinase 39 Neighboring gene tudor domain-containing protein 10-like

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
ceramide synthase 6
Names
LAG1 homolog, ceramide synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193132.1NP_001180061.1  ceramide synthase 6

    See identical proteins and their annotated locations for NP_001180061.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000002
    UniProtKB/TrEMBL
    E1BP45
    Related
    ENSBTAP00000053442.2, ENSBTAT00000061640.3
    Conserved Domains (2) summary
    cd00086
    Location:80127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131324
    TRAM_LAG1_CLN8; TLC domain

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    27353327..27712377 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024978051.1XP_024833819.1  ceramide synthase 6 isoform X1

    Related
    ENSBTAP00000071330.1, ENSBTAT00000080491.1
    Conserved Domains (2) summary
    cd00086
    Location:80127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131324
    TRAM_LAG1_CLN8; TLC domain
  2. XM_024978054.1XP_024833822.1  ceramide synthase 6 isoform X2

    Related
    ENSBTAP00000065875.1, ENSBTAT00000083511.1
    Conserved Domains (2) summary
    cd00086
    Location:80127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131283
    TRAM_LAG1_CLN8; TLC domain
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