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EMC2 ER membrane protein complex subunit 2 [ Bos taurus (domestic cattle) ]

Gene ID: 616813, updated on 30-Jan-2025
Official Symbol
EMC2provided by VGNC
Official Full Name
ER membrane protein complex subunit 2provided by VGNC
Primary source
VGNC:VGNC:28463
See related
BGD:BT22661; EnsemblRapid:ENSBTAG00070005582
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TTC35
Orthologs
human mouse all
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See EMC2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (55970879..56023776, complement)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104974087 Neighboring gene uncharacterized LOC112449528 Neighboring gene transmembrane protein 74 Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene eukaryotic translation initiation factor 3 subunit E

Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • KIAA0103, MGC128301

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of EMC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ER membrane protein complex subunit 2
Names
TPR repeat protein 35
tetratricopeptide repeat domain 35
tetratricopeptide repeat protein 35

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080327.1 → NP_001073796.1  ER membrane protein complex subunit 2

    See identical proteins and their annotated locations for NP_001073796.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021027
    UniProtKB/Swiss-Prot
    A5PJE6, Q5E993
    Related
    ENSBTAP00070007313.1, ENSBTAT00070012794.1
    Conserved Domains (2) summary
    sd00006
    Location:120 → 150
    TPR; TPR repeat [structural motif]
    cl26002
    Location:102 → 240
    TPR_11; TPR repeat

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    55970879..56023776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005215583.5 → XP_005215640.3  ER membrane protein complex subunit 2 isoform X1

    UniProtKB/Swiss-Prot
    A5PJE6, Q5E993
    Conserved Domains (2) summary
    sd00006
    Location:120 → 150
    TPR; TPR repeat [structural motif]
    cl26002
    Location:102 → 240
    TPR_11; TPR repeat
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5E993.1 GenPept UniProtKB/Swiss-Prot:Q5E993

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials